PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_007583-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 239aa    MW: 27176.4 Da    PI: 6.9853
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_007583-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.35e-0770121454
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    ++  rE+ RRdr+N++ ++L   l + +  ++ +K +K+ iL  A++ +++L
  NNU_007583-RA  70 TKACREKMRRDRLNDRHDNLFLELCSiLEPGRLPKADKVVILNDATRLLNQL 121
                    5678***********977777766666666699**************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.71266121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-470126No hitNo description
PfamPF000101.5E-470121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-972149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-873146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MDSDQNCSWF VEYMDDVQAA EYLWPPQVIS DQAVSGLGLG LEVLLKDENC AEKSCLKKRG  60
RIESSAGPGT KACREKMRRD RLNDRHDNLF LELCSILEPG RLPKADKVVI LNDATRLLNQ  120
LHLEAQKLKE TNDVLKVTIQ NLKVVIRCIP TDTEKVELRD EKVKLKAEKE RMEQMVKGLC  180
VPCPFVPHHT FPAATTTYSV NGKNIPYQPS YLSPMAMWQW MPSASWDTTQ DHVLRPPVA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010256783.11e-155PREDICTED: transcription factor ILR3-like
TrEMBLM0S8J61e-70M0S8J6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P16550_0014e-70(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-45bHLH family protein